Download MendeleyCryo-EM structure of complete transmembrane channel E289A mutant Vibrio cholerae Cytolysin
Mondal, A.K., Sengupta, N., Singh, M., Biswas, R., Lata, K., Lahiri, I., Dutta, S., Chattopadhyay, K.(null) J Biol Chem
7YL9
Cryo-EM structure of complete transmembrane channel E289A mutant Vibrio cholerae Cytolysin
- PDB DOI: https://doi.org/10.2210/pdb7YL9/pdb
- EM Map EMD-33215: EMDB EMDataResource
- Classification: TOXIN
- Organism(s): Vibrio cholerae
- Expression System: Escherichia coli
- Mutation(s): Yes
- Membrane Protein: Yes OPMPDBTM
- Deposited: 2022-07-25 Released: 2022-08-31
- Funding Organization(s): Department of Biotechnology (DBT, India), Department of Science & Technology (DST, India)
Experimental Data Snapshot
- Method: ELECTRON MICROSCOPY
- Resolution: 4.70 Å
- Aggregation State: PARTICLE
- Reconstruction Method: SINGLE PARTICLE
wwPDB Validation 3D Report Full Report
This is version 1.0 of the entry. See complete history.
Literature
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Hemolysin | 593 | Vibrio cholerae | Mutation(s): 1 Gene Names: hlyA_3, hlyA_2, D6U24_17690, ERS013199_02025, ERS013202_03387 Membrane Entity: Yes |  | |
UniProt | |||||
Find proteins for P09545 (Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)) Explore P09545 Go to UniProtKB: P09545 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P09545 | ||||
Sequence AnnotationsExpand | |||||
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Experimental Data & Validation
Experimental Data
- Method: ELECTRON MICROSCOPY
- Resolution: 4.70 Å
- Aggregation State: PARTICLE
- Reconstruction Method: SINGLE PARTICLE
| Task | Software Package | Version |
|---|---|---|
| MODEL REFINEMENT | PHENIX |
Entry History & Funding Information
Deposition Data
- Released Date: 2022-08-31 Deposition Author(s): Mondal, A.K., Sengupta, N., Singh, M., Biswas, R., Lata, K., Lahiri, I., Dutta, S., Chattopadhyay, K.
| Funding Organization | Location | Grant Number |
|---|---|---|
| Department of Biotechnology (DBT, India) | India | BT/INF/22/SP22844/2017 |
| Department of Science & Technology (DST, India) | India | SR/FST/LSII-039/2015 |
Revision History (Full details and data files)
- Version 1.0: 2022-08-31
Type: Initial release
