STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cgl1060PEP phosphonomutase or related enzyme. (231 aa)    
Predicted Functional Partners:
poxB
PYRUVATE DEHYDROGENASE; Belongs to the TPP enzyme family.
  
  
 0.860
Cgl0782
Conserved hypothetical protein.
   
    0.854
Cgl2537
NADPH quinone reductase or related Zn-dependent oxidoreductase.
   
  
 0.854
mshD
GCN5-related N-acetyltransferase; Catalyzes the transfer of acetyl from acetyl-CoA to desacetylmycothiol (Cys-GlcN-Ins) to form mycothiol.
   
    0.854
prpB1
PROBABLE METHYLISOCITRIC ACID LYASE; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate via an alpha-carboxy-carbanion intermediate.
  
     0.751
Cgl1126
Conserved hypothetical membrane protein.
   
    0.637
Cgl2372
Predicted acetyltransferase.
   
    0.610
Cgl2538
MMGE/PRPD FAMILY PROTEIN.
 
  
 0.602
Cgl1059
Strong similarity to hypothetical protein Rv2133c-Mycobacterium tuberculosis.
  
    0.575
Cgl1058
Similarity to 2,3-PDG dependent phosphoglycerate mutase pgm-Amycolatopsis methanolica.
       0.558
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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