Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cgl0230 | Cgl0231 | cg0283 | cg0284 | Membrane protein. | Drug exporter of the RND superfamily. | 0.550 |
Cgl0230 | tgt | cg0283 | cg0285 | Membrane protein. | PUTATIVE TRNA-GUANINE TRANSGLYCOSYLASE; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to [...] | 0.569 |
Cgl0231 | Cgl0230 | cg0284 | cg0283 | Drug exporter of the RND superfamily. | Membrane protein. | 0.550 |
Cgl0231 | Cgl0524 | cg0284 | cg0611 | Drug exporter of the RND superfamily. | Secreted protein. | 0.432 |
Cgl0231 | Cgl0584 | cg0284 | cg0676 | Drug exporter of the RND superfamily. | Conserved hypothetical protein. | 0.981 |
Cgl0231 | Cgl1064 | cg0284 | cg1211 | Drug exporter of the RND superfamily. | PUTATIVE MARR-FAMILY TRANSCRIPTIONAL REGULATOR. | 0.804 |
Cgl0231 | Cgl2858 | cg0284 | cg3163 | Drug exporter of the RND superfamily. | PROBABLE ACYLTRANSFERASE. | 0.707 |
Cgl0231 | mmpL1 | cg0284 | cg3174 | Drug exporter of the RND superfamily. | Exporter of the MMPL family. | 0.522 |
Cgl0231 | qcrB | cg0284 | cg2403 | Drug exporter of the RND superfamily. | CYTOCHROME B, MEMBRANE PROTEIN; Cytochrome b subunit of the cytochrome bc1 complex, an essential component of the respiratory electron transport chain required for ATP synthesis. The bc1 complex catalyzes the oxidation of menaquinol and the reduction of cytochrome c in the respiratory chain. The bc1 complex operates through a Q-cycle mechanism that couples electron transfer to generation of the proton gradient that drives ATP synthesis. | 0.402 |
Cgl0231 | tgt | cg0284 | cg0285 | Drug exporter of the RND superfamily. | PUTATIVE TRNA-GUANINE TRANSGLYCOSYLASE; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to [...] | 0.837 |
Cgl0524 | Cgl0231 | cg0611 | cg0284 | Secreted protein. | Drug exporter of the RND superfamily. | 0.432 |
Cgl0524 | mmpL1 | cg0611 | cg3174 | Secreted protein. | Exporter of the MMPL family. | 0.416 |
Cgl0584 | Cgl0231 | cg0676 | cg0284 | Conserved hypothetical protein. | Drug exporter of the RND superfamily. | 0.981 |
Cgl1064 | Cgl0231 | cg1211 | cg0284 | PUTATIVE MARR-FAMILY TRANSCRIPTIONAL REGULATOR. | Drug exporter of the RND superfamily. | 0.804 |
Cgl2858 | Cgl0231 | cg3163 | cg0284 | PROBABLE ACYLTRANSFERASE. | Drug exporter of the RND superfamily. | 0.707 |
Cgl2858 | mmpL1 | cg3163 | cg3174 | PROBABLE ACYLTRANSFERASE. | Exporter of the MMPL family. | 0.486 |
mmpL1 | Cgl0231 | cg3174 | cg0284 | Exporter of the MMPL family. | Drug exporter of the RND superfamily. | 0.522 |
mmpL1 | Cgl0524 | cg3174 | cg0611 | Exporter of the MMPL family. | Secreted protein. | 0.416 |
mmpL1 | Cgl2858 | cg3174 | cg3163 | Exporter of the MMPL family. | PROBABLE ACYLTRANSFERASE. | 0.486 |
qcrB | Cgl0231 | cg2403 | cg0284 | CYTOCHROME B, MEMBRANE PROTEIN; Cytochrome b subunit of the cytochrome bc1 complex, an essential component of the respiratory electron transport chain required for ATP synthesis. The bc1 complex catalyzes the oxidation of menaquinol and the reduction of cytochrome c in the respiratory chain. The bc1 complex operates through a Q-cycle mechanism that couples electron transfer to generation of the proton gradient that drives ATP synthesis. | Drug exporter of the RND superfamily. | 0.402 |
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