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Diffusion Modelling

Topographic Error of SOM Under Control

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Abstract

The traditional self-organized map (SOM) is learned by Kohonen learning and the most common 2-dimensional grids defining the structure of the map are the hexagonal grid and the rectangular grid. A novel model of self-organization is based on hexagonal grid and diffusion modeling in continuous space which is a good approximation of endorphins propagation and nitric oxide generation in the real brain. Therefore the structure of the system is described by neuron coordinates instead of neighborhood relationships in traditional SOM. The discussed neuron activation using the diffusion process and novel diffusive learning algorithm is based on this activation mentioned above. The novel structure and algorithm are demonstrated on simple examples and real economic applications.

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References

  1. Abdelsamea MM, Gnecco G, Gaber MM (2017) A SOM-based Chan–Vese model for unsupervised image segmentation. Soft Comput 21(8):2047–2067

    Article  Google Scholar 

  2. Alonso E (2010) Computational neuroscience for advancing artificial intelligence: models, methods and applications: models, methods and applications. Premier reference source, Medical Information Science Reference

  3. Arik S, Huang T, Lai W, Liu Q (2015) Neural Information processing: 22nd international conference, ICONIP 2015, Istanbul, Turkey, November 9–12, 2015, Proceedings. No. díl 3 in Lecture notes in computer science. Springer, Berlin

  4. Brogioli D, Vailati A (2000) Diffusive mass transfer by nonequilibrium fluctuations: Fick’s law revisited. Phys Rev E 63:012105

    Article  Google Scholar 

  5. Crank J (1975) The mathematics of diffusion/by J. Crank, 2nd edn. Clarendon Press, Oxford

    Google Scholar 

  6. Cussler E (2009) Diffusion: mass transfer in fluid systems. Cambridge series in chemical engineering. Cambridge University Press, Cambridge

    Book  Google Scholar 

  7. Delgado S, Gonzalo C, Martinez E, Arquero A (2007) Visualizing high-dimensional input data with growing self-organizing maps. Comput Ambient Intell 580–587

  8. ECFIN: Statistical annex to european economy. autumn 2017. Tech. rep., European Commission (2017). https://ec.europa.eu/info/files/statistical-annex-european-economy-autumn-2017_en

  9. Edelman G, Gally J (1992) Nitric oxide: linking space and time in the brain. Proc Natl Acad Sci 89(24):11651–11652

    Article  Google Scholar 

  10. Espenson J (1995) Chemical kinetics and reaction mechanisms. Advanced chemistry series. McGraw-Hill, New York

    Google Scholar 

  11. Fisher RA (1936) The use of multiple measurements in taxonomic problems. Ann Eugen 7(2):179–188

    Article  Google Scholar 

  12. Gally JA, Montague PR, Reeke GN, Edelman GM (1990) The no hypothesis: possible effects of a short-lived, rapidly diffusible signal in the development and function of the nervous system. Proc Natl Acad Sci 87(9):3547–3551

    Article  Google Scholar 

  13. Garthwaite J, Charles SL, Chess-Williams R (1988) Endothelium-derived relaxing factor release on activation of NMDA receptors suggests role as intercellular messenger in the brain. Nature 336(6197):385–388

    Article  Google Scholar 

  14. Gelperin A (1994) Nitric oxide mediates network oscillations of olfactory interneurons in a terrestrial mollusc. Nature 369(6475):61–63

    Article  Google Scholar 

  15. Graupe D (2016) Deep learning neural networks: design and case studies. World Scientific Publishing, Singapore

    Book  Google Scholar 

  16. Hamel L (2016) Som quality measures: an efficient statistical approach. In: Proceedings of the 11th international workshop WSOM 2016. Springer, Houston, pp 49–59

  17. Hartell NA (1996) Strong activation of parallel fibers produces localized calcium transients and a form of ltd that spreads to distant synapses. Neuron 16(3):601–610

    Article  Google Scholar 

  18. Hölscher C (1997) Nitric oxide, the enigmatic neuronal messenger: its role in synaptic plasticity. Trends Neurosci 20(7):298–303

    Article  Google Scholar 

  19. Hrebik R, Kukal J (2015) The economics and data whitening: aata visualisation. In: Federated conference on software development and object technologies. Springer, Berlin, pp 91–101

  20. Hrebik R, Kukal J (2015) Multivarietal data whitening of main trends in economic development. Mathematical methods in economics. University of West Bohemia, Plzeň, pp 279–284

    MATH  Google Scholar 

  21. Kohonen T (2012) Self-organizing maps. Springer series in information sciences. Springer, Berlin

    MATH  Google Scholar 

  22. Lancaster JR (1994) Simulation of the diffusion and reaction of endogenously produced nitric oxide. Proc Natl Acad Sci 91(17):8137–8141

    Article  Google Scholar 

  23. Lopez PF, Araujo CPS, Baez PG, Martin GS (2003) Diffusion associative network: diffusive hybrid neuromodulation and volume learning. In: International work-conference on artificial neural networks. Springer, Berlin, pp 54–61

  24. Lopez PF, Baez PG, Araujo CPS (2015) Nitric oxide diffusion and multi-compartmental systems: modeling and implications. In: International conference on neural information processing. Springer, Berlin, pp 523–531

  25. Oja E, Kaski S (1999) Kohonen maps. Elsevier Science, Amsterdam

    MATH  Google Scholar 

  26. OShea M, Colbert R, Williams L, Dunn S (1998) Nitric oxide compartments in the mushroom bodies of the locust brain. NeuroReport 9(2):333–336

  27. Park JH, Straub VA, O’Shea M (1998) Anterograde signaling by nitric oxide: characterization and in vitro reconstitution of an identified nitrergic synapse. J Neurosci 18(14):5463–5476

    Article  Google Scholar 

  28. Philippides A, Husbands P, O’Shea M (2000) Four-dimensional neuronal signaling by nitric oxide: a computational analysis. J Neurosci 20(3):1199–1207

    Article  Google Scholar 

  29. Pölzlbauer G (2004) Survey and comparison of quality measures for self-organizing maps

  30. Rettberg A, Zanella M, Amann M, Keckeisen M, Rammig F (2009) Analysis, architectures and modelling of embedded systems: third IFIP TC 10 international embedded systems symposium, IESS 2009, Langenargen, Germany, September 14–16, 2009, Proceedings. IFIP advances in information and communication technology. Springer, Berlin

  31. Senapati M (2006) Advanced engineering chemistry. Laxmi Publications

  32. Snyder SH, Bredt DS (1991) Nitric oxide as a neuronal messenger. Trends Pharmacol Sci 12:125–128

    Article  Google Scholar 

  33. Thomson JJ (1904) On the structure of the atom: an investigation of the stability and periods of oscillation of a number of corpuscles arranged at equal intervals around the circumference of a circle; with application of the results to the theory of atomic structure. Philos Mag Ser 67(39):237–265

    Article  Google Scholar 

  34. Turajlić E (2016) Application of neural networks to denoising of CT images of lungs. In: 2016 XI International symposium on telecommunications (BIHTEL). IEEE, pp 1–6

  35. Wood J, Garthwaite J (1994) Models of the diffusional spread of nitric oxide: implications for neural nitric oxide signalling and its pharmacological properties. Neuropharmacology 33(11):1235–1244

    Article  Google Scholar 

Download references

Acknowledgements

The authors would like to acknowledge the support of the research grant SGS20/190/OHK4/3T/14. The second author also acknowledges the support of the OP VVV MEYS funded project CZ.02.1.01/0.0/0.0/16_019/0000765 Research Center for Informatics.

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Correspondence to Radek Hrebik.

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Hrebik, R., Kukal, J. Diffusion Modelling. Neural Process Lett 54, 835–852 (2022). https://doi.org/10.1007/s11063-021-10660-1

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